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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OPUNC05G18920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 332aa MW: 37419.4 Da PI: 8.4956 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.5 | 1.9e-10 | 47 | 87 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k +rr+++NReAAr+sR+RKka++++Le+ +L++ ++L OPUNC05G18920.1 47 KTQRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 87 889*************************9877777766555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.5E-6 | 43 | 112 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.266 | 45 | 89 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.13E-7 | 47 | 90 | No hit | No description |
Pfam | PF00170 | 1.8E-7 | 47 | 87 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.7E-8 | 47 | 92 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 50 | 65 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.8E-30 | 129 | 204 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence Send to blast |
MVYASPGIDA STDPEIDKNI RMFEQRHLPT PIASDSSDKS KGKLGQKTQR RLAQNREAAR 60 KSRLRKKAYV QQLENSRLKL TQLEQELQRA RQQGIIISTS GDQHRSTSEN EALAFNMEYM 120 RWLEEHNKQI NELRAAVHTH AVDDDLHSIV SSVMAHHEEI FRIKGLAAKS DALHVLSATW 180 RTPLERCFLW LGGFRPSDLL KLLADQLEPL TEQQLASICN QQQSSKEAEE TLSQGMEMIQ 240 HSLAETVASQ LGRACSSSSP PSNAADHTAA AWGKIGDMES LLQQADDLRM QSLQKMQRAL 300 TTRQSARALL LVSDYFSRLR ALSSLWIARP QL |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC129718 | 1e-122 | AC129718.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OSJNBa0088I06, complete sequence. | |||
GenBank | AP014961 | 1e-122 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015639148.1 | 0.0 | PREDICTED: transcription factor HBP-1b(c1)-like isoform X1 | ||||
Swissprot | Q41558 | 1e-157 | HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment) | ||||
TrEMBL | A0A0E0L463 | 0.0 | A0A0E0L463_ORYPU; Uncharacterized protein | ||||
STRING | OB05G28710.1 | 0.0 | (Oryza brachyantha) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP16946 | 11 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06950.4 | 1e-120 | bZIP family protein |